Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899739.1_cds_XP_016449767.1_44281
CDS Infomation

[gene=LOC107774669] [db_xref=GeneID:107774669] [protein=PH-interacting protein-like] [protein_id=XP_016449767.1] [location=join(42657..43012,43522..43673,44432..44671,44961..45070,45157..45234,45353..45459,47610..47704,47785..47918,48383..48486,48554..48631,48808..48889,49200..49385)] [gbkey=CDS]
Sequence

ATGGATTCAGGGAAGTGTACATCTAGAAATGGCGCTACATTATCAAGTATGGCACCTACA
AGTTTCCTGAATAGGGTATACACAAAATCTCAATTTGAAGAAGAATCGAGATTTGCTGAA
CATACCCCAATGAAGGATGTAAATATTGACCTTAGAGAAGTTTATTTTCTGATTATGCAT
TTTTTGTCATCTGGGCCATGCCGAAAAACGCTTGGGATACTCCGTGATGAACTTTTGGAA
TATGAGCTTCTACCTAGGAGATATCATACTTGGTATTCAAGAAAAGATGTACCCAGTGGA
GATGACGATGACAATGGTGTTTCTTTCCCTCTAAATTATGAAGATCTGGTGCTAAGGTAT
CCTCATGTTGAAAAGGATCACTTAGTAAAGTTGCTTAAACAACTGCTGCTGAGTTTGGGT
CCTCCATTGCAATGTGGTGGGGGAGATGCCCCGGGTGCTGCTGATGTCCCCACGCTACTT
GGATCTGGGCCTTTTTCTCTTTTGGCTTGTGAGAGAAACGGAGTAAATAAGCAGGCTCAA
TCCCTTCCTTCATACCTCCGTTGGCCACACATGCAGGCTAATCAGGTGCATGGTCTAAGT
TTGAGAGAGATTGGAGGTGGTTTCCCAAAACATCACCGTGCTCCATCTATTCGTCTTGCA
AGTTATGCTATTGCAAAGCCGTCAACTATGGTTCAGAAGATGCAAACCATAAAGAAACTA
AGGGGACATAGGGATGCTGTTTATTGTGCAATATTTGACCGCTCAGGAAGATATGTGATT
ACTGGATCTGATGATCGCCTTGTCAAGATTTGGTCAATGGAAACTGGATTTTGCCTGGCT
AGTTGCCGAGGACATGAAGGTGACATCACTGATTTGGCTGTCAGTTCAAACAATGCTTTA
GTGGCGTCTGCATCAAATGACTACAGCATTCGAGTTTGGCGTTTGCCAGATGGGTTACCT
ATTTCAGTTTTGCGTGGACACACTGGAGCTGTCACTGCTATCGCATTTACTCCAAGGCCT
AGCTCTGTGTATCAGCTTCTATCGTCATCAGATGACGGAACTTGTCGCATTTGGGATGCT
AGGTATTCCCAGTGTGTTCCACGCGTTTACTCGCCGAGGCCAAAGGATAACGTTTCTGTG
AAGAGCAGTGCTCCCGCAATAACCAACATTCAGTCCTCAAGTAATACATCACATAACCAT
CAAATTTTGTGTTGTGCATACAATGCCAATGGAACTGTCTTTGTCACTGGCAGCTCTGAT
ACTTTAGCGAGGGTCTGGAGTGCTTGTAAATTCTCCCCAGATCGCCCCGAGGAACTAAAT
CATGAAATAGATACATTATCTGGTCATGAAAATGATGTCAACTATGTACAGTTCAGTGGC
TGTGCAGTTGCTTCACGATCTTCAACTTCTGATTCATTTGTGGAGGACTGCATTCCAAAA
TTTAGGAACTCTTGGTTTAGCCATGACAACATAGTCACTTGTTCTCGGGATGGAAGTGCA
ATTATTTGGACCACAAAACCACGCAAGTCGTCCCATGGAAAACTTGGACGTTCTTGGGGT
AAGGCATATCATCTTAAAGTTCCTCCCCCGCCAATGCCACCACAGCCTCCTCGAGGAGGG
CCACGACAGAGATTTCGCCCTACTCCTCGTGGTGTTAACATGATAGTATGGAGCCTGGAT
AATCGCTTTGTACTGGCTGCTATAATGGGTATCTTATCTTAA

Peptide Sequence

PEP ID

XP_016449767.1
PEP Infomation

PREDICTED: PH-interacting protein-like [Nicotiana tabacum]
Sequence

MDSGKCTSRNGATLSSMAPTSFLNRVYTKSQFEEESRFAEHTPMKDVNIDLREVYFLIMH
FLSSGPCRKTLGILRDELLEYELLPRRYHTWYSRKDVPSGDDDDNGVSFPLNYEDLVLRY
PHVEKDHLVKLLKQLLLSLGPPLQCGGGDAPGAADVPTLLGSGPFSLLACERNGVNKQAQ
SLPSYLRWPHMQANQVHGLSLREIGGGFPKHHRAPSIRLASYAIAKPSTMVQKMQTIKKL
RGHRDAVYCAIFDRSGRYVITGSDDRLVKIWSMETGFCLASCRGHEGDITDLAVSSNNAL
VASASNDYSIRVWRLPDGLPISVLRGHTGAVTAIAFTPRPSSVYQLLSSSDDGTCRIWDA
RYSQCVPRVYSPRPKDNVSVKSSAPAITNIQSSSNTSHNHQILCCAYNANGTVFVTGSSD
TLARVWSACKFSPDRPEELNHEIDTLSGHENDVNYVQFSGCAVASRSSTSDSFVEDCIPK
FRNSWFSHDNIVTCSRDGSAIIWTTKPRKSSHGKLGRSWGKAYHLKVPPPPMPPQPPRGG
PRQRFRPTPRGVNMIVWSLDNRFVLAAIMGILS

Transcript Sequence

Gene sequence data has not been registered.